Researchers learning the European olm, and different cave dwellers, imagine these unfamiliar beings can present necessary solutions about evolution and even human eye ailments. Credit: © Javier Ábalos Alvarez from Madrid, España, CC BY-SA 2.0
In watery underground caverns, there are unfamiliar beings that dwell in an everlasting midnight. Over the course of generations, these animals have tailored to their remoted and distinctive environments, and scientists imagine their pasty pores and skin and blind eyes could maintain secrets and techniques to evolution – and to genetic variations that would reveal insights on longevity, surviving hunger, and eye ailments in people.
“These caves are isolated worlds,” stated Professor Peter Trontelj, a zoologist on the University of Ljubljana in Slovenia. “If you go a couple of meters (below the surface), you enter a new world with totally different ecological conditions.”
Certain animals are capable of adapt to those darkish habitats the place no vegetation develop, making lightless caves, like these present in Slovenia, pure laboratories of evolutionary biology.
Trontelj heads up the GENEVOLCAV mission, which is investigating the European olm. These uncommon cave salamanders resemble small ghostly swimming snakes with 4 spindly legs and a crocodile’s snout. Long in the past, the olm’s ancestors lived above floor, however as soon as caught in these caves, they underwent dramatic bodily adjustments to deal with their new atmosphere. The olm will not be the one creature capable of evolve on this means.
Scientists dive deep to gather DNA from one of many world’s final unexplored frontiers. Credit: © Alejandro Martínez, Juan Valenciano and Enrique Domínguez, 2010
Historically, evolutionary biologists thought that if we have been to return in time and replay the timeline of evolution, we might simply as doubtless take completely different evolutionary paths and the world and creatures in it could look utterly completely different. But caves present us that this isn’t the case. Animals’ variations to light- and nutrient-poor environments, like underground caves, are “usually quite predictable”, stated Trontelj. “We now know that every time it will go the same way.”
Trontelj and his colleagues have proven that that is true inside European olms, that are present in central and South-Eastern Europe. GENEVOLCAV has overturned our understanding of those uncommon cave salamanders. Instead of only one species, as was beforehand thought, they’ve found 9 doubtlessly completely different species of olm, every of which developed related traits independently within the everlasting watery darkish.
“If you go a couple of metres (below the surface), you enter a new world with totally different ecological conditions.”
— Professor Peter Trontelj, GENEVOLCAV mission coordinator
While all have the identical bleached pores and skin, sightless eyes, and elongated snouts, these species descended from completely different particular person ancestors which discovered their methods into these midnight caves. “Everything happened independently, but in a more or less parallel way,” stated Trontelj.
DNA diving
The mission goals to assemble the olm genome, which is about 16 instances bigger than the human genome, and determine the genetic adjustments which have allowed olms to adapt to their distinctive environments.
“The (physical) changes are the same or very similar, but the question is: ‘Are they caused by the same genes (and) are they the same mutations?’” Trontelj requested. To reply these questions, he and colleagues cave dive into the darkish recesses underground, typically descending into pits 400 metres deep, to measure olms and swab their skins to gather DNA. They will need hundreds of samples to investigate these questions, which could have important implications for human medicine.
“There are several traits of (olms) that are interesting from a wider perspective,” said Trontelj. These milky amphibians can live for more than hundreds of years, 10 times longer than their surface-based ancestors, and are able to survive years of starvation. In the dark, olms also lose their colour and go blind. “It’s already known that this ??pigment loss and eye degeneration in cave fishes can be caused by several different genes, some of which are linked,” he said. Scientists have also linked this group of genes to “some pathological states in human eye degeneration and albinism.”
“Understanding these mechanisms that happen in a predictable way might also help our understanding of some degenerative diseases in humans,” he said.
But olms, which are now only able to survive in these niche habitats, are vulnerable. “These caves and subterranean waters are quite endangered, and sometimes even very threatened by pollution,” said Trontelj. “If we don’t describe the new species, if they don’t have names, they will not receive the conservation attention that a fully-fledged species might.”
The same holds true for the worms, crustaceans and sometimes even fish that inhabit the dark recesses of the Earth.
Underground database
Alejandro Martínez, lead on the ANCAVE project, is working to create a database of such creatures. His database, which already has more than 330 000 entries, draws on all references to underground cave fauna published in scientific literature in every written language.
“They resemble things that we know from the fossil record, but which are now extinct.”
— Alejandro Martínez, ANCAVE
It is called the “Stygofauna Mundi” database, in reference to a book by naturalist Lazare Botosaneanu, who pioneered the study of these subterranean creatures. “We are working on making all of this information publicly available,” Martínez said.
Of that database, about 10% of entries are animals that particularly interest Martínez: those that live in coastal aquifers, also known as anchialine environments. What makes these underground caverns special is that their water is salty, fed through underground cracks and fissures by the nearby ocean, with a mix of freshwater seeping in from above. These environments are found all over the world, including in the Canary Islands where Martínez grew up.
And the animals in them are unique. “Many of those animals are exclusive to this type of habitat, they are not found elsewhere,” said Martínez. They look “weird” and somehow “primitive,” he said. “They resemble things that we know from the fossil record, but which are now extinct.”
Others share ancestors with animals in the ocean, but their seclusion in the caverns mean they cannot interbreed, and this allows scientists to compare cave-dwellers with their kin in the sunshine.
“(Some) are similar to other animals found in the deep ocean nowadays,” he said. “They are genetically close to each other, but morphologically (physically), they are very different… By comparing these types of species across the world, we can try to better understand how animals change shape to adapt to a new environment.”
He has added species to the database himself, and as part of the ANCAVE project has sampled about 50 caves in the Mediterranean, the Caribbean, and several Atlantic oceanic archipelagos. In these caverns, he gauged the relative abundance of animals within them, captured some and then described them morphologically and genetically.
Midnight caves
However, the database is just the first step. “We can see the generalities that happen across all these lineages,” he explained. “We can get rid of these confounding effects of phylogeny (how a species or group evolves) and understand morphological change.”
By documenting the breadth of biodiversity in the midnight caves underground, scientists can illuminate the nature of evolution and how animals change.
But Martinez also recognizes that the database and research into the subterranean world will only raise more questions. In fact, that is why he keeps returning to these dark watery caverns.
The research in this article was funded by the EU.
This article was originally published in Horizon, the EU Research & Innovation Magazine.
